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Welcome to B-SOiD tutorial!

Welcome to the B-SOiD tutorial page. B-SOiD is an open-source tool to discover and extract behaviors and sub-actions from pose estimation data. A full discussion of its use and features can be found in our Nature Communications article. Currently, B-SOiD supports SLEAP, DeepLabCut, and OpenPose.

Contents:

• Loading and system requirements
  • Operating system
  • CPU RAM
• Installation and usage
  • Installation
  • Usage
• Running for the first time
  • Load data and preprocess
  • Retrieve data from working directory
  • Extract and embed features
  • Identify and tweak number of clusters
  • What did B-SOiD learn?
  • Create a model
  • Generate video snippets for interpretation
  • Predict old/new files using a model
• Troubleshooting